BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C05LP1|AL426178
(206 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 403 e-113
>3x_Contig1619
Length = 7770
Score = 403 bits (202), Expect = e-113
Identities = 204/206 (99%)
Strand = Plus / Minus
Query: 1 tctttatcctaaaattgcgaatgggawtaatgtatcttttaatgatgggtttcttgatac 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1063 tctttatcctaaaattgcgaatgggaataatgtatcttttaatgatgggtttcttgatac 1004
Query: 61 tccttgaattaaggctgagaatacgatagcaataccaatacctgctcctaataatccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 tccttgaattaaggctgagaatacgatagcaataccaatacctgctcctaataatccaat 944
Query: 121 tgttgagatacctgctccaatatatttagctgctaatactaattgcatgttatttatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 tgttgagatacctgctccaatatatttagctgctaatactaattgcatgttatttatatt 884
Query: 181 ataaatatttattatmaatatattat 206
||||||||||||||| ||||||||||
Sbjct: 883 ataaatatttattataaatatattat 858
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1625
Number of Sequences: 1807
Number of extensions: 1625
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 206
length of database: 10,358,551
effective HSP length: 15
effective length of query: 191
effective length of database: 10,331,446
effective search space: 1973306186
effective search space used: 1973306186
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.3 bits)